I got in touch with an expert and he looked at the project and answered as below.
(BTW I have 'cgi-bin' in a route as there are old URLs out in the wild that relate to my domain previously being hosted on an Apache server and which I cannot change.)
The answer
I digged a little more into the source code of the mvc helpers and, yes, the two issues (I had a similar problem Html.BeginForm with overload causes form action to be '/cgi-bin?action=Index&controller=Home' and so the HomeController is bypassed) are related since Url.Action and Html.BeginForm boil down to calling one and the same method: UrlHelper.GetUrl... Now, what this method does is:
- Retrieve the current URL including controller, action, area...
- Add or replace the parameter(s) you specify,
- Find the best matching route! <==
- If there are any route variables - push the provided parameters into those variables.
- Stick the rest of the parameters into the query string <==
I have deliberately highlighted point 3 & 5, with point 3 being the most important. So, UrlHelper.GetUrl (and Url.Action and Html.BeginForm respectively) needs a route and it searches through the available ones to find the first match.
Now, here comes the problem with your mixed webforms-mvc app - an issue which is not present when you are dealing purely with MVC: You are using MapPageRoute!!! Please, note that it is different from MapRoute. And MapPageRoute uses the PageRouteHandler class to create the route whereas MapRoute uses the MvcRouteHandler class and it makes all the difference because PageRouteHandler creates the route in such a way that it's always a good match for UrlHelper.GetUrl("ActionName", "ControllerName") with the action name and controller name being thrown into the query string as parameters (point 5).
So, what happens with your set-up is that Url.Action is searching for a route and is hitting the first one created by MapPageRoute and in your case this is:
routes.MapPageRoute("cgi-bin", "cgi-bin/{*theRestcgi-bin}", "~/home/Search.aspx");
That's where that arcane cgi-bin part of the query string comes from, giving the impression that the framework is actually searching for some virtual/physical folder.
As for the proper solution: either define a suitable route or specify the url as a simple string the way you have done. I think, your solution is the better one as you won't have to move around the route definitions in the RouteConfig class.
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